@article {3726,
	title = {Bayesian Estimation of Experimental Parameters in Stochastic Inertial Systems: Theory, Simulations, and Experiments with Objects Levitated in Vacuum},
	journal = {Phys. Rev. Appl.},
	volume = {19},
	year = {2023},
	month = {Jun},
	pages = {064059},
	keywords = {LF, MF},
	doi = {10.1103/PhysRevApplied.19.064059},
	url = {https://link.aps.org/doi/10.1103/PhysRevApplied.19.064059},
	author = {{\v S}iler, M. and Svak, V. and Jon{\'a}{\v s}, A. and Simpson, S.H. and Brzobohat{\'y}, O. and Zem{\'a}nek, P.}
}
@article { BrzobohatyACSPHOT19,
	title = {Tunable Soft-Matter Optofluidic Waveguides Assembled by Light},
	journal = {ACS Phot.},
	volume = {6},
	year = {2019},
	pages = {403-410},
	keywords = {LF, MF},
	doi = {10.1021/acsphotonics.8b01331},
	author = {Oto Brzobohat{\'y} and Luk{\'a}{\v s} Chv{\'a}tal and A. Jon{\'a}{\v s} and M {\v S}iler and J. Ka{\v n}ka and J Je{\v z}ek and P. Zem{\'a}nek}
}
@article {OzbakirRSOS18,
	title = {A new type of microphotoreactor with integrated optofluidic waveguide based on solid-air nanoporous aerogels},
	journal = {Royal Society Open Science},
	volume = {5},
	year = {2018},
	pages = {180802},
	keywords = {BF, MF},
	doi = {10.1098/rsos.180802},
	author = {Ozbakir, Y. and A. Jon{\'a}{\v s} and Alper Kiraz and Erkey, C.}
}
@article {RashidJLT18,
	title = {Optofluidic Dye Lasers Based on Holey Fibers: Modeling and Performance	Analysis},
	journal = {J. Lightwave. Technol.},
	volume = {36},
	year = {2018},
	pages = {4114-4122},
	keywords = {BF, MF},
	doi = {10.1109/JLT.2018.2860684},
	author = {Rashid, Zeeshan and A. Jon{\'a}{\v s} and Buczynski, Ryszard and Alper Kiraz}
}
@article {RashidASS18,
	title = {Reversible switching of wetting properties and erasable patterning of polymer surfaces using plasma oxidation and thermal treatment},
	journal = {Appl. Surf. Sci.},
	volume = {441},
	year = {2018},
	pages = {841-852},
	keywords = {BF, MF},
	doi = {10.1016/j.apsusc.2018.02.089},
	author = {Rashid, Zeeshan and Atay, Ipek and Soydan, Seren and Yagci, M. Baris and A. Jon{\'a}{\v s} and Yilgor, Emel and Alper Kiraz and Yilgor, Iskender}
}
@article {BalochSAA18,
	title = {Sensitivity of compositional measurement of high-pressure fluid mixtures using microcantilever frequency response},
	journal = {Sensors Actuators A},
	volume = {278},
	year = {2018},
	pages = {111-126},
	keywords = {BF, MF},
	doi = {/10.1016/j.sna.2018.05.025},
	author = {Baloch, Shadi Khan and A. Jon{\'a}{\v s} and Alper Kiraz and Alaca, B.	Erdem and Erkey, Can}
}
@article {PilatSENS17,
	title = {Effects of Infrared Optical Trapping on Saccharomyces cerevisiae in a Microfluidic System},
	journal = {Sensors},
	volume = {17},
	year = {2017},
	pages = {2640},
	keywords = {BF, MF},
	doi = {10.3390/s17112640},
	author = {Z. Pil{\'a}t and A. Jon{\'a}{\v s} and J Je{\v z}ek and P. Zem{\'a}nek}
}
@article { JonasJOSAB17,
	title = {Thermal tuning of spectral emission from optically trapped liquid-crystal droplet resonators},
	journal = {J. Opt. Soc. Am. B},
	volume = {34},
	year = {2017},
	pages = {1855-1864},
	keywords = {BF, MF},
	doi = {10.1364/JOSAB.34.001855},
	author = {A. Jon{\'a}{\v s} and Z. Pil{\'a}t and J Je{\v z}ek and Silva Bernatov{\'a} and T. Fo{\v r}t and P. Zem{\'a}nek and Mehdi Aas and Alper Kiraz}
}
@article {AasOE13,
	title = {Spectral tuning of lasing emission from optofluidic droplet microlasers using optical stretching},
	journal = {Opt. Express},
	volume = {21},
	number = {18},
	year = {2013},
	pages = {21380-21394},
	keywords = {MF},
	doi = {10.1364/OE.21.021380},
	author = {Mehdi Aas and A. Jon{\'a}{\v s} and Alper Kiraz and Oto Brzobohat{\'y} and J Je{\v z}ek and Z. Pil{\'a}t and P. Zem{\'a}nek}
}
@article { SamekLPL11,
	title = {Characterization of oil-producing microalgae using Raman spectroscopy},
	journal = {Laser Phys. Lett.},
	volume = {8},
	year = {2011},
	pages = {701{\textendash}709},
	keywords = {MF},
	doi = {10.1002/lapl.201110060},
	author = {O. Samek and P. Zem{\'a}nek and A. Jon{\'a}{\v s} and Telle, H. H.}
}
@article {JonasLA10,
	title = {Diffusive Mixing of Polymers Investigated by Raman Microspectroscopy and	Microrheology},
	journal = {Langmuir},
	volume = {26},
	number = {17},
	year = {2010},
	pages = {14223-14230},
	keywords = {MF},
	doi = {10.1021/la101498h},
	author = {A. Jon{\'a}{\v s} and De Luca, A. C. and Pesce, G. and Rusciano, G. and A. Sasso and Caserta, S. and Guido, S. and Marrucci, G.}
}
@article { Samek2010,
	title = {Raman Microspectroscopy of Individual Algal Cells: Sensing Unsaturation of Storage Lipids in vivo},
	journal = {Sensors},
	volume = {10},
	year = {2010},
	pages = {8635{\textendash}8651},
	keywords = {MF},
	doi = {10.3390/s100908635},
	author = {O. Samek and A. Jon{\'a}{\v s} and Z. Pil{\'a}t and P. Zem{\'a}nek and L. Nedbal and T{\v r}{\'\i}ska, J. and Kotas, P. and M. Trt{\'\i}lek}
}
@article { BartschCPC09,
	title = {Detecting Sequential Bond Formation Using Three-Dimensional Thermal Fluctuation Analysis},
	journal = {Chem. Phys. Chem.},
	volume = {10},
	number = {9-10, SI},
	year = {2009},
	pages = {1541-1547},
	keywords = {MF},
	doi = {10.1002/cphc.200900211},
	author = {Bartsch, Tobias F. and Fisinger, Samo and Kochanczyk, Martin D. and Huang, Rongxin and A. Jon{\'a}{\v s} and Florin, Ernst-Ludwig}
}
@article { PinyuPRL09,
	title = {Direct Measurement of the Nonconservative Force Field Generated by	Optical Tweezers},
	journal = {Phys. Rev. Lett.},
	volume = {103},
	year = {2009},
	pages = {108101},
	keywords = {MF},
	doi = {10.1103/PhysRevLett.103.108101},
	author = {Wu, Pinyu and Huang, Rongxin and Tischer, Christian and A. Jon{\'a}{\v s} and Florin, Ernst-Ludwig}
}
@article { JonasEPH08,
	title = {Light at work: The use of optical forces for particle	manipulation, sorting, and analysis.},
	journal = {Electophoresis},
	volume = {29},
	year = {2008},
	pages = {4813{\textendash}4851},
	keywords = {MF},
	doi = {10.1002/elps.200800484},
	author = {A. Jon{\'a}{\v s} and P. Zem{\'a}nek}
}
@article { SilerNJP08,
	title = {Surface delivery of a single nanoparticle under moving	evanescent standing-wave illumination},
	journal = {New. J. Phys.},
	volume = {10},
	year = {2008},
	pages = {113010},
	keywords = {MF},
	issn = {1367-2630},
	doi = {10.1088/1367-2630/10/11/113010},
	author = {M {\v S}iler and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and A. Jon{\'a}{\v s} and P. Zem{\'a}nek}
}
@article {JaklJMO03,
	title = {Behaviour of an optically trapped probe approaching a dielectric interface},
	journal = {J Mod. Optics},
	volume = {50},
	year = {2003},
	pages = {1615-1625},
	keywords = {MF},
	doi = {10.1080/09500340308235235},
	author = {P J{\'a}kl and M. {\v S}er{\'y} and J Je{\v z}ek and A. Jon{\'a}{\v s} and M. Li{\v s}ka and P. Zem{\'a}nek}
}
@article {ZemanekOPTCOMM03,
	title = {Theoretical comparison of optical traps created by standing wave and single beam},
	journal = {Opt. Commun.},
	volume = {220},
	year = {2003},
	pages = {401-412},
	keywords = {MF},
	doi = {10.1016/S0030-4018(03)01409-3},
	author = {P. Zem{\'a}nek and A. Jon{\'a}{\v s} and P J{\'a}kl and M. {\v S}er{\'y} and J Je{\v z}ek and M. Li{\v s}ka}
}
@article {ZemanekJOSAA02,
	title = {Simplified description of optical forces acting on a nanoparticle in the Gaussian standing wave},
	journal = {J. Opt. Soc. Am. A},
	volume = {19},
	year = {2002},
	pages = {1025-1034},
	keywords = {MF},
	doi = {10.1364/JOSAA.19.001025},
	author = {P. Zem{\'a}nek and A. Jon{\'a}{\v s} and M. Li{\v s}ka}
}
@article {JonasOL01,
	title = {Single beam trapping in front of reflective surfaces},
	journal = {Opt. Lett.},
	volume = {26},
	year = {2001},
	pages = {1466{\textendash}1468},
	keywords = {MF},
	doi = {10.1364/OL.26.001466},
	author = {A. Jon{\'a}{\v s} and P. Zem{\'a}nek and E. - L. Florin}
}
@article {ZemanekOL99,
	title = {Optical trapping of nanoparticles and microparticles using Gaussian standing wave.},
	journal = {Opt. Lett.},
	volume = {24},
	year = {1999},
	pages = {1448{\textendash}1450},
	keywords = {MF},
	doi = {10.1364/OL.24.001448},
	author = {P. Zem{\'a}nek and A. Jon{\'a}{\v s} and L. {\v S}r{\'a}mek and M. Li{\v s}ka}
}
@article {ZemanekOPTCOMM98b,
	title = {Optical trapping of Rayleigh particles using a Gaussian standing wave},
	journal = {Opt. Commun.},
	volume = {151},
	year = {1998},
	pages = {273{\textendash}285},
	keywords = {MF},
	doi = {10.1016/S0030-4018(98)00093-5},
	author = {P. Zem{\'a}nek and A. Jon{\'a}{\v s} and L. {\v S}r{\'a}mek and M. Li{\v s}ka}
}
